Pseudomonas mendocina NK-01, MDS_2924

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_2924
Name
Replicon chromosome
Genomic location 3225986 - 3226519 (- strand)

Cross-References

RefSeq YP_004380707.1
GI 330503838
Entrez 10457706
INSDC AEB58955.1
NCBI Locus Tag MDS_2924
UniParc UPI000206E4A8
UniProtKB Acc F4E015
UniProtKB ID F4E015_PSEMN
UniRef100 UniRef100_F4E015
UniRef50 UniRef50_Q4KEW3
UniRef90 UniRef90_Q8RQ01

Product

Feature Type CDS
Coding Frame 1
Product Name
translation initiation factor IF-3
Synonyms
Evidence for Translation
Charge (pH 7) 5.93
Kyte-Doolittle Hydrophobicity Value -0.627
Molecular Weight (kDa) 20.2
Isoelectric Point (pI) 9.93

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 582 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002828 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_2924

Human Homologs

References

No references are associated with this feature.