Pseudomonas mendocina NK-01, MDS_3007
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas mendocina NK-01
GCF_000204295.1|latest |
| Locus Tag |
MDS_3007
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 3316463 - 3317392 (- strand) |
Cross-References
| RefSeq | YP_004380790.1 |
| GI | 330503921 |
| Entrez | 10457789 |
| NCBI Locus Tag | MDS_3007 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
alpha/beta hydrolase domain-containing protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 0.98 |
| Kyte-Doolittle Hydrophobicity Value | 0.047 |
| Molecular Weight (kDa) | 33315.0 |
| Isoelectric Point (pI) | 7.25 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 325 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001165 (2285 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: MDS_3007
Search term: alpha/beta hydrolase domain-containing protein
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
arylacetamide deacetylase like 2 [Source:HGNC Symbol;Acc:HGNC:24427]
E-value:
3.0e-07
Percent Identity:
36.0
|
|
Ensembl
110, assembly
GRCh38.p14
|
arylacetamide deacetylase like 2 [Source:HGNC Symbol;Acc:HGNC:24427]
E-value:
3.0e-07
Percent Identity:
36.0
|
References
No references are associated with this feature.