Pseudomonas mendocina NK-01, MDS_3086

Gene Feature Overview

Strain	Pseudomonas mendocina NK-01 GCF_000204295.1|latest
Locus Tag	MDS_3086
Name
Replicon	chromosome
Genomic location	3410528 - 3411460 (- strand)

Cross-References

RefSeq	YP_004380869.1
GI	330504000
Entrez	10457868
INSDC	AEB59117.1
NCBI Locus Tag	MDS_3086
UniParc	UPI000206DB9F
UniProtKB Acc	F4DLZ5
UniProtKB ID	F4DLZ5_PSEMN
UniRef100	UniRef100_F4DLZ5
UniRef50	UniRef50_D7HXF1
UniRef90	UniRef90_F4DLZ5

Product

Feature Type	CDS
Coding Frame	1
Product Name	D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
Synonyms
Evidence for Translation
Charge (pH 7)	-6.43
Kyte-Doolittle Hydrophobicity Value	0.030
Molecular Weight (kDa)	34118.8
Isoelectric Point (pI)	5.39

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 619 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001240 (513 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: MDS_3086 Search term: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein

Human Homologs

References