Pseudomonas mendocina NK-01, MDS_3347

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_3347
Name
Replicon chromosome
Genomic location 3701390 - 3701599 (- strand)

Cross-References

RefSeq YP_004381130.1
GI 330504261
Entrez 10458129
INSDC AEB59378.1
NCBI Locus Tag MDS_3347
UniParc UPI000206E264
UniProtKB Acc F4DPR6
UniProtKB ID F4DPR6_PSEMN
UniRef100 UniRef100_F4DPR6
UniRef50 UniRef50_Q8P8F5
UniRef90 UniRef90_A4XWV7

Product

Feature Type CDS
Coding Frame 1
Product Name
cold-shock DNA-binding protein family protein
Synonyms
Evidence for Translation
Charge (pH 7) -0.54
Kyte-Doolittle Hydrophobicity Value -0.648
Molecular Weight (kDa) 7.7
Isoelectric Point (pI) 6.52

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 501 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001118 (495 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_3347

Human Homologs

References

No references are associated with this feature.