Pseudomonas mendocina NK-01, MDS_3470

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_3470
Name
Replicon chromosome
Genomic location 3835908 - 3837437 (+ strand)

Cross-References

RefSeq YP_004381253.1
GI 330504384
Entrez 10458252
INSDC AEB59501.1
NCBI Locus Tag MDS_3470
UniParc UPI000206E4E0
UniProtKB Acc F4DQS4
UniProtKB ID F4DQS4_PSEMN
UniRef100 UniRef100_F4DQS4
UniRef50 UniRef50_K9NJG1
UniRef90 UniRef90_F4DQS4

Product

Feature Type CDS
Coding Frame 1
Product Name
diguanylate cyclase
Synonyms
Evidence for Translation
Charge (pH 7) 5.49
Kyte-Doolittle Hydrophobicity Value -0.141
Molecular Weight (kDa) 56952.5
Isoelectric Point (pI) 8.38

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 453 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG016179 (151 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_3470

Human Homologs

References

No references are associated with this feature.