Pseudomonas mendocina NK-01, MDS_3861

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_3861
Name
Replicon chromosome
Genomic location 4245257 - 4247560 (- strand)

Cross-References

RefSeq YP_004381644.1
GI 330504775
Entrez 10458643
INSDC AEB59892.1
NCBI Locus Tag MDS_3861
UniParc UPI000206E197
UniProtKB Acc F4DV14
UniProtKB ID F4DV14_PSEMN
UniRef100 UniRef100_F4DV14
UniRef50 UniRef50_E2XL25
UniRef90 UniRef90_W6QSV6

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -2.79
Kyte-Doolittle Hydrophobicity Value -0.102
Molecular Weight (kDa) 83.1
Isoelectric Point (pI) 6.46

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 117 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003272 (553 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_3861

Human Homologs

References

No references are associated with this feature.