Pseudomonas mendocina NK-01, MDS_3917

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_3917
Name
Replicon chromosome
Genomic location 4313180 - 4313935 (- strand)

Cross-References

RefSeq YP_004381700.1
GI 330504831
Entrez 10458699
NCBI Locus Tag MDS_3917

Product

Feature Type CDS
Coding Frame 1
Product Name
triosephosphate isomerase
Synonyms
Evidence for Translation
Charge (pH 7) -12.15
Kyte-Doolittle Hydrophobicity Value 0.290
Molecular Weight (kDa) 25806.2
Isoelectric Point (pI) 4.43

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 595 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004393 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_3917

Human Homologs

Ensembl 110, assembly GRCh38.p14
triosephosphate isomerase 1 [Source:HGNC Symbol;Acc:HGNC:12009]
E-value: 1.1e-44
Percent Identity: 45.8
Ensembl 110, assembly GRCh38.p14
triosephosphate isomerase 1 [Source:HGNC Symbol;Acc:HGNC:12009]
E-value: 1.1e-44
Percent Identity: 45.8
Ensembl 110, assembly GRCh38.p14
triosephosphate isomerase 1 [Source:HGNC Symbol;Acc:HGNC:12009]
E-value: 1.1e-44
Percent Identity: 45.8

References

No references are associated with this feature.