Pseudomonas mendocina NK-01, MDS_3926

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_3926
Name
Replicon chromosome
Genomic location 4323560 - 4324606 (- strand)

Cross-References

RefSeq YP_004381709.1
GI 330504840
Entrez 10458708
NCBI Locus Tag MDS_3926

Product

Feature Type CDS
Coding Frame 1
Product Name
carbamoyl phosphate synthase small subunit
Synonyms
Evidence for Translation
Charge (pH 7) -10.26
Kyte-Doolittle Hydrophobicity Value -0.276
Molecular Weight (kDa) 38103.8
Isoelectric Point (pI) 5.38

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 625 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004402 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_3926

Human Homologs

Ensembl 110, assembly GRCh38.p14
carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase [Source:HGNC Symbol;Acc:HGNC:1424]
E-value: 1.2e-57
Percent Identity: 37.7
Ensembl 110, assembly GRCh38.p14
carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase [Source:HGNC Symbol;Acc:HGNC:1424]
E-value: 1.2e-57
Percent Identity: 37.7

References

No references are associated with this feature.