Pseudomonas mendocina NK-01, MDS_4012

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4012
Name
Replicon chromosome
Genomic location 4419670 - 4420596 (+ strand)

Cross-References

RefSeq YP_004381795.1
GI 330504926
Entrez 10458794
INSDC AEB60043.1
NCBI Locus Tag MDS_4012
UniParc UPI000206E50E
UniProtKB Acc F4DWU1
UniProtKB ID F4DWU1_PSEMN
UniRef100 UniRef100_F4DWU1
UniRef50 UniRef50_G8Q650
UniRef90 UniRef90_F4DWU1

Product

Feature Type CDS
Coding Frame 1
Product Name
ABC transporter permease
Synonyms
Evidence for Translation
Charge (pH 7) 2.43
Kyte-Doolittle Hydrophobicity Value 1.095
Molecular Weight (kDa) 32375.5
Isoelectric Point (pI) 8.98

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 295 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000136 (413 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4012

Human Homologs

References

No references are associated with this feature.