Pseudomonas mendocina NK-01, MDS_4031

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4031
Name
Replicon chromosome
Genomic location 4436101 - 4436736 (- strand)

Cross-References

RefSeq YP_004381814.1
GI 330504945
Entrez 10458813
INSDC AEB60062.1
NCBI Locus Tag MDS_4031
UniParc UPI000206E5E0
UniProtKB Acc F4DXK0
UniProtKB ID F4DXK0_PSEMN
UniRef100 UniRef100_F4DXK0
UniRef50 UniRef50_Q9AIU0
UniRef90 UniRef90_W6QR75

Product

Feature Type CDS
Coding Frame 1
Product Name
TetR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -4.98
Kyte-Doolittle Hydrophobicity Value -0.186
Molecular Weight (kDa) 23.7
Isoelectric Point (pI) 5.39

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 363 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG025156 (13 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4031

Human Homologs

References

No references are associated with this feature.