Pseudomonas mendocina NK-01, MDS_4100

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4100
Name
Replicon chromosome
Genomic location 4504035 - 4505048 (- strand)

Cross-References

RefSeq YP_004381883.1
GI 330505014
Entrez 10458882
INSDC AEB60131.1
NCBI Locus Tag MDS_4100
UniParc UPI000206DA00
UniProtKB Acc F4DXR9
UniProtKB ID F4DXR9_PSEMN
UniRef100 UniRef100_F4DXR9
UniRef50 UniRef50_Q9X6V6
UniRef90 UniRef90_A4XYX7

Product

Feature Type CDS
Coding Frame 1
Product Name
rare lipoprotein A
Synonyms
Evidence for Translation
Charge (pH 7) 7.85
Kyte-Doolittle Hydrophobicity Value -0.222
Molecular Weight (kDa) 36167.8
Isoelectric Point (pI) 9.49

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 348 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001683 (530 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4100

Human Homologs

References

No references are associated with this feature.