Pseudomonas mendocina NK-01, MDS_4101

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4101
Name
Replicon chromosome
Genomic location 4505045 - 4506055 (- strand)

Cross-References

RefSeq YP_004381884.1
GI 330505015
Entrez 10458883
INSDC AEB60132.1
NCBI Locus Tag MDS_4101
UniParc UPI000206DA01
UniProtKB Acc F4DXS0
UniProtKB ID F4DXS0_PSEMN
UniRef100 UniRef100_F4DXS0
UniRef50 UniRef50_Q4K5G5
UniRef90 UniRef90_A4XYX8

Product

Feature Type CDS
Coding Frame 1
Product Name
lytic murein transglycosylase B
Synonyms
Evidence for Translation
Charge (pH 7) -8.27
Kyte-Doolittle Hydrophobicity Value -0.238
Molecular Weight (kDa) 37445.0
Isoelectric Point (pI) 4.82

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 230 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001682 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4101

Human Homologs

References

No references are associated with this feature.