Pseudomonas mendocina NK-01, MDS_4112

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4112
Name
Replicon chromosome
Genomic location 4516445 - 4517029 (- strand)

Cross-References

RefSeq YP_004381895.1
GI 330505026
Entrez 10458894
INSDC AEB60143.1
NCBI Locus Tag MDS_4112
UniParc UPI000206DA0B
UniProtKB Acc F4DYG5
UniProtKB ID F4DYG5_PSEMN
UniRef100 UniRef100_F4DYG5
UniRef50 UniRef50_A0A0B7DFD4
UniRef90 UniRef90_F4DYG5

Product

Feature Type CDS
Coding Frame 1
Product Name
peptidase S16, lon domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) -10.19
Kyte-Doolittle Hydrophobicity Value 0.207
Molecular Weight (kDa) 21152.3
Isoelectric Point (pI) 4.42

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 172 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001671 (531 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4112

Human Homologs

References

No references are associated with this feature.