Pseudomonas mendocina NK-01, MDS_4147

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4147
Name
Replicon chromosome
Genomic location 4553417 - 4554235 (- strand)

Cross-References

RefSeq YP_004381930.1
GI 330505061
Entrez 10458929
INSDC AEB60178.1
NCBI Locus Tag MDS_4147
UniParc UPI000206DAFC
UniProtKB Acc F4DYK0
UniProtKB ID F4DYK0_PSEMN
UniRef100 UniRef100_F4DYK0
UniRef50 UniRef50_B2JW34
UniRef90 UniRef90_F4DYK0

Product

Feature Type CDS
Coding Frame 1
Product Name
xylose isomerase-like TIM barrel
Synonyms
Evidence for Translation
Charge (pH 7) -8.70
Kyte-Doolittle Hydrophobicity Value -0.117
Molecular Weight (kDa) 29762.6
Isoelectric Point (pI) 4.93

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 77 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000237 (388 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4147

Human Homologs

References

No references are associated with this feature.