Pseudomonas mendocina NK-01, MDS_4188

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4188
Name
Replicon chromosome
Genomic location 4598316 - 4599488 (- strand)

Cross-References

RefSeq YP_004381971.1
GI 330505102
Entrez 10458970
INSDC AEB60219.1
NCBI Locus Tag MDS_4188
UniParc UPI000206DC00
UniProtKB Acc F4DZD0
UniProtKB ID F4DZD0_PSEMN
UniRef100 UniRef100_F4DZD0
UniRef50 UniRef50_P08310
UniRef90 UniRef90_L8MCA9

Product

Feature Type CDS
Coding Frame 1
Product Name
muconate cycloisomerase
Synonyms
Evidence for Translation
Charge (pH 7) -3.94
Kyte-Doolittle Hydrophobicity Value -0.070
Molecular Weight (kDa) 42441.2
Isoelectric Point (pI) 6.25

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 391 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003051 (464 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4188

Human Homologs

References

No references are associated with this feature.