Pseudomonas mendocina NK-01, MDS_4229

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4229
Name
Replicon chromosome
Genomic location 4644806 - 4646659 (+ strand)

Cross-References

RefSeq YP_004382012.1
GI 330505143
Entrez 10459011
INSDC AEB60260.1
NCBI Locus Tag MDS_4229
UniParc UPI000206DD0C
UniProtKB Acc F4DZH1
UniProtKB ID F4DZH1_PSEMN
UniRef100 UniRef100_F4DZH1
UniRef50 UniRef50_F4DZH1
UniRef90 UniRef90_F4DZH1

Product

Feature Type CDS
Coding Frame 1
Product Name
TonB-dependent receptor, plug
Synonyms
Evidence for Translation
Charge (pH 7) -9.09
Kyte-Doolittle Hydrophobicity Value -0.556
Molecular Weight (kDa) 68140.3
Isoelectric Point (pI) 5.66

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 331 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000897 (3061 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4229

Human Homologs

References

No references are associated with this feature.