Pseudomonas mendocina NK-01, MDS_4238

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4238
Name
Replicon chromosome
Genomic location 4652288 - 4652764 (- strand)

Cross-References

RefSeq YP_004382021.1
GI 330505152
Entrez 10459020
INSDC AEB60269.1
NCBI Locus Tag MDS_4238
UniParc UPI000206DDE3
UniProtKB Acc F4DZI0
UniProtKB ID F4DZI0_PSEMN
UniRef100 UniRef100_F4DZI0
UniRef50 UniRef50_P45149
UniRef90 UniRef90_Q889Q6

Product

Feature Type CDS
Coding Frame 1
Product Name
6,7-dimethyl-8-ribityllumazine synthase
Synonyms
Evidence for Translation
Charge (pH 7) -1.56
Kyte-Doolittle Hydrophobicity Value 0.363
Molecular Weight (kDa) 16509.9
Isoelectric Point (pI) 5.77

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 612 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001631 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4238

Human Homologs

References

No references are associated with this feature.