Strain |
Pseudomonas mendocina NK-01
GCF_000204295.1|latest |
Locus Tag |
MDS_4295
|
Name |
|
Replicon | chromosome |
Genomic location | 4693730 - 4694923 (- strand) |
RefSeq | YP_004382078.1 |
GI | 330505209 |
Entrez | 10459077 |
NCBI Locus Tag | MDS_4295 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
elongation factor Tu
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | -10.75 |
Kyte-Doolittle Hydrophobicity Value | -0.162 |
Molecular Weight (kDa) | 43.5 |
Isoelectric Point (pI) | 5.23 |
Individual Mappings | |
Additional evidence for subcellular localization |
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
4J0Q | TRANSLATION | 01/31/13 | Crystal structure of Pseudomonas putida elongation factor Tu (EF-Tu) | Pseudomonas putida | 2.294 | X-RAY DIFFRACTION | 92.2 |
4IW3 | METAL BINDING PROTEIN/TRANSLATION | 01/23/13 | Crystal structure of a Pseudomonas putida prolyl-4-hydroxylase (P4H) in complex with elongation factor Tu (EF-Tu) | Pseudomonas putida | 2.697 | X-RAY DIFFRACTION | 92.2 |
4ZV4 | TRANSLATION | 05/18/15 | Structure of Tse6 in complex with EF-Tu | Pseudomonas aeruginosa; Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) | 3.504 | X-RAY DIFFRACTION | 90.7 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG001434 (870 members) |
Putative Inparalogs |
1 predicted inparalogs elongation factor Tu (MDS_4307) 100.0% identity |
STRING database | Search for predicted protein-protein interactions using:
Search term: MDS_4295
Search term: elongation factor Tu
|
Ensembl
110, assembly
GRCh38.p14
|
Tu translation elongation factor, mitochondrial [Source:HGNC Symbol;Acc:HGNC:12420]
E-value:
5.1e-132
Percent Identity:
55.4
|