Pseudomonas mendocina NK-01, MDS_4408

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4408
Name
Replicon chromosome
Genomic location 4831016 - 4831309 (+ strand)

Cross-References

RefSeq YP_004382191.1
GI 330505322
Entrez 10459190
INSDC AEB60439.1
NCBI Locus Tag MDS_4408
UniParc UPI000206E1BD
UniProtKB Acc F4DMD9
UniProtKB ID F4DMD9_PSEMN
UniRef100 UniRef100_F4DMD9
UniRef50 UniRef50_A4XZS0
UniRef90 UniRef90_F4DMD9

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -2.02
Kyte-Doolittle Hydrophobicity Value 1.305
Molecular Weight (kDa) 10.4
Isoelectric Point (pI) 4.49

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 6 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000479 (526 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4408

Human Homologs

References

No references are associated with this feature.