Pseudomonas mendocina NK-01, MDS_4550

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4550
Name
Replicon chromosome
Genomic location 4985065 - 4985544 (- strand)

Cross-References

RefSeq YP_004382333.1
GI 330505464
Entrez 10459332
INSDC AEB60581.1
NCBI Locus Tag MDS_4550
UniParc UPI0001502471
UniProtKB Acc F4DP54
UniProtKB ID F4DP54_PSEMN
UniRef100 UniRef100_A4Y049
UniRef50 UniRef50_A6UYD9
UniRef90 UniRef90_A6UYD9

Product

Feature Type CDS
Coding Frame 1
Product Name
dinucleoside polyphosphate hydrolase
Synonyms
Evidence for Translation
Charge (pH 7) 3.17
Kyte-Doolittle Hydrophobicity Value -0.561
Molecular Weight (kDa) 18.8
Isoelectric Point (pI) 9.13

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 243 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000328 (533 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4550

Human Homologs

References

No references are associated with this feature.