Pseudomonas mendocina NK-01, MDS_4562

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4562
Name
Replicon chromosome
Genomic location 4995523 - 4996188 (- strand)

Cross-References

RefSeq YP_004382345.1
GI 330505476
Entrez 10459344
INSDC AEB60593.1
NCBI Locus Tag MDS_4562
UniParc UPI000206E5F9
UniProtKB Acc F4DP66
UniProtKB ID F4DP66_PSEMN
UniRef100 UniRef100_F4DP66
UniRef50 UniRef50_A0A098FUP7
UniRef90 UniRef90_W6R0G1

Product

Feature Type CDS
Coding Frame 1
Product Name
fumarylacetoacetate (FAA) hydrolase
Synonyms
Evidence for Translation
Charge (pH 7) -8.41
Kyte-Doolittle Hydrophobicity Value -0.009
Molecular Weight (kDa) 23723.9
Isoelectric Point (pI) 4.92

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 511 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000315 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4562

Human Homologs

Ensembl 110, assembly GRCh38.p14
fumarylacetoacetate hydrolase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:14169]
E-value: 3.9e-41
Percent Identity: 39.8

References

No references are associated with this feature.