Pseudomonas mendocina NK-01, MDS_4636

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4636
Name
Replicon chromosome
Genomic location 5078833 - 5079471 (- strand)

Cross-References

RefSeq YP_004382419.1
GI 330505550
Entrez 10459418
INSDC AEB60667.1
NCBI Locus Tag MDS_4636
UniParc UPI000206DA22
UniProtKB Acc F4DQ24
UniProtKB ID F4DQ24_PSEMN
UniRef100 UniRef100_F4DQ24
UniRef50 UniRef50_Q54SE2
UniRef90 UniRef90_G8Q4S4

Product

Feature Type CDS
Coding Frame 1
Product Name
1-Cys peroxiredoxin
Synonyms
Evidence for Translation
Charge (pH 7) -4.83
Kyte-Doolittle Hydrophobicity Value -0.357
Molecular Weight (kDa) 23.9
Isoelectric Point (pI) 5.34

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 575 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002190 (528 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4636

Human Homologs

Ensembl 110, assembly GRCh38.p14
peroxiredoxin 6 [Source:HGNC Symbol;Acc:HGNC:16753]
E-value: 4.7e-60
Percent Identity: 53.9

References

No references are associated with this feature.