Pseudomonas mendocina NK-01, MDS_4663

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4663
Name
Replicon chromosome
Genomic location 5110629 - 5111402 (+ strand)

Cross-References

RefSeq YP_004382446.1
GI 330505577
Entrez 10459445
INSDC AEB60694.1
NCBI Locus Tag MDS_4663
UniParc UPI000206DA3D
UniProtKB Acc F4DQT8
UniProtKB ID F4DQT8_PSEMN
UniRef100 UniRef100_F4DQT8
UniRef50 UniRef50_Q1LSG8
UniRef90 UniRef90_F4DQT8

Product

Feature Type CDS
Coding Frame 1
Product Name
AraC family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 4.28
Kyte-Doolittle Hydrophobicity Value -0.063
Molecular Weight (kDa) 28.7
Isoelectric Point (pI) 8.50

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 241 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG030403 (9 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4663

Human Homologs

References

No references are associated with this feature.