Pseudomonas mendocina NK-01, MDS_4792

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4792
Name
Replicon chromosome
Genomic location 5249503 - 5249862 (- strand)

Cross-References

RefSeq YP_004382575.1
GI 330505706
Entrez 10459574
INSDC AEB60823.1
NCBI Locus Tag MDS_4792
UniParc UPI000206DE13
UniProtKB Acc F4DRV3
UniProtKB ID F4DRV3_PSEMN
UniRef100 UniRef100_F4DRV3
UniRef50 UniRef50_A0A0D0RFG0
UniRef90 UniRef90_F4DRV3

Product

Feature Type CDS
Coding Frame 1
Product Name
endoribonuclease L-PSP family protein
Synonyms
Evidence for Translation
Charge (pH 7) -3.80
Kyte-Doolittle Hydrophobicity Value 0.135
Molecular Weight (kDa) 12.8
Isoelectric Point (pI) 4.60

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 400 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001525 (1734 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4792

Human Homologs

References

No references are associated with this feature.