Pseudomonas mendocina NK-01, MDS_4812

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4812
Name
Replicon chromosome
Genomic location 5270220 - 5270762 (- strand)

Cross-References

RefSeq YP_004382595.1
GI 330505726
Entrez 10459594
INSDC AEB60843.1
NCBI Locus Tag MDS_4812
UniParc UPI000206DEE9
UniProtKB Acc F4DSL3
UniProtKB ID F4DSL3_PSEMN
UniRef100 UniRef100_F4DSL3
UniRef50 UniRef50_A0A085HYV7
UniRef90 UniRef90_F4DSL3

Product

Feature Type CDS
Coding Frame 1
Product Name
transferase
Synonyms
Evidence for Translation
Charge (pH 7) -1.36
Kyte-Doolittle Hydrophobicity Value -0.093
Molecular Weight (kDa) 19483.1
Isoelectric Point (pI) 6.63

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 505 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000065 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4812
Search term: transferase

Human Homologs

References

No references are associated with this feature.