Pseudomonas mendocina NK-01, MDS_4841

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4841
Name
Replicon chromosome
Genomic location 5300325 - 5301215 (- strand)

Cross-References

RefSeq YP_004382624.1
GI 330505755
Entrez 10459623
INSDC AEB60872.1
NCBI Locus Tag MDS_4841
UniParc UPI000206DF06
UniProtKB Acc F4DSP2
UniProtKB ID F4DSP2_PSEMN
UniRef100 UniRef100_F4DSP2
UniRef50 UniRef50_Q9I5C3
UniRef90 UniRef90_F4DSP2

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 0.61
Kyte-Doolittle Hydrophobicity Value 0.063
Molecular Weight (kDa) 32808.9
Isoelectric Point (pI) 7.39

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 535 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000789 (459 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4841

Human Homologs

References

No references are associated with this feature.