Pseudomonas fulva 12-X, Psefu_0298
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas fulva 12-X
GCF_000213805.1|latest |
| Locus Tag |
Psefu_0298
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 335711 - 336865 (- strand) |
Cross-References
| RefSeq | YP_004472376.1 |
| GI | 333898503 |
| Entrez | 10656799 |
| NCBI Locus Tag | Psefu_0298 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
oxygen-independent coproporphyrinogen III oxidase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -8.71 |
| Kyte-Doolittle Hydrophobicity Value | -0.252 |
| Molecular Weight (kDa) | 42780.1 |
| Isoelectric Point (pI) | 5.42 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 582 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000377 (534 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: Psefu_0298
Search term: oxygen-independent coproporphyrinogen III oxidase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
radical S-adenosyl methionine domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25634]
E-value:
1.2e-50
Percent Identity:
35.3
|
References
No references are associated with this feature.