Pseudomonas fulva 12-X, Psefu_0626
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas fulva 12-X
GCF_000213805.1|latest |
| Locus Tag |
Psefu_0626
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 700063 - 701256 (+ strand) |
Cross-References
| RefSeq | YP_004472698.1 |
| GI | 333898825 |
| Entrez | 10656596 |
| NCBI Locus Tag | Psefu_0626 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
translation elongation factor Tu
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -10.75 |
| Kyte-Doolittle Hydrophobicity Value | -0.173 |
| Molecular Weight (kDa) | 43.6 |
| Isoelectric Point (pI) | 5.23 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 4J0Q | TRANSLATION | 01/31/13 | Crystal structure of Pseudomonas putida elongation factor Tu (EF-Tu) | Pseudomonas putida | 2.294 | X-RAY DIFFRACTION | 92.4 |
| 4IW3 | METAL BINDING PROTEIN/TRANSLATION | 01/23/13 | Crystal structure of a Pseudomonas putida prolyl-4-hydroxylase (P4H) in complex with elongation factor Tu (EF-Tu) | Pseudomonas putida | 2.697 | X-RAY DIFFRACTION | 92.4 |
| 4ZV4 | TRANSLATION | 05/18/15 | Structure of Tse6 in complex with EF-Tu | Pseudomonas aeruginosa; Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) | 3.504 | X-RAY DIFFRACTION | 90.9 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001434 (870 members) |
| Putative Inparalogs |
1 predicted inparalogs translation elongation factor Tu (Psefu_0638) 100.0% identity |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: Psefu_0626
Search term: translation elongation factor Tu
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
Tu translation elongation factor, mitochondrial [Source:HGNC Symbol;Acc:HGNC:12420]
E-value:
1.3e-132
Percent Identity:
56.3
|
References
No references are associated with this feature.