Pseudomonas fulva 12-X, Psefu_1041

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fulva 12-X
GCF_000213805.1|latest
Locus Tag
Psefu_1041
Name
Replicon chromosome
Genomic location 1127870 - 1129246 (+ strand)

Cross-References

RefSeq YP_004473113.1
GI 333899240
Entrez 10658295
INSDC AEF21019.1
NCBI Locus Tag Psefu_1041
UniParc UPI00020CC158
UniProtKB Acc F6ABD1
UniProtKB ID F6ABD1_PSEF1
UniRef100 UniRef100_F6ABD1
UniRef50 UniRef50_P0AGD9
UniRef90 UniRef90_Q4KHQ9

Product

Feature Type CDS
Coding Frame 1
Product Name
signal recognition particle protein
Synonyms
Evidence for Translation
Charge (pH 7) 13.74
Kyte-Doolittle Hydrophobicity Value -0.147
Molecular Weight (kDa) 49469.6
Isoelectric Point (pI) 10.32

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 664 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001936 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psefu_1041

Human Homologs

Ensembl 110, assembly GRCh38.p14
signal recognition particle 54 [Source:HGNC Symbol;Acc:HGNC:11301]
E-value: 4.0e-40
Percent Identity: 29.0
Ensembl 110, assembly GRCh38.p14
signal recognition particle 54 [Source:HGNC Symbol;Acc:HGNC:11301]
E-value: 4.0e-40
Percent Identity: 29.0
Ensembl 110, assembly GRCh38.p14
signal recognition particle 54 [Source:HGNC Symbol;Acc:HGNC:11301]
E-value: 4.0e-40
Percent Identity: 29.0
Ensembl 110, assembly GRCh38.p14
signal recognition particle 54 [Source:HGNC Symbol;Acc:HGNC:11301]
E-value: 4.0e-40
Percent Identity: 29.0

References

No references are associated with this feature.