Pseudomonas fulva 12-X, Psefu_2006

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fulva 12-X
GCF_000213805.1|latest
Locus Tag
Psefu_2006
Name
Replicon chromosome
Genomic location 2135912 - 2137066 (+ strand)

Cross-References

RefSeq YP_004474071.1
GI 333900198
Entrez 10659312
INSDC AEF21977.1
NCBI Locus Tag Psefu_2006
UniParc UPI00020CCC80
UniProtKB Acc F6A950
UniProtKB ID F6A950_PSEF1
UniRef100 UniRef100_F6A950
UniRef50 UniRef50_Q9HZ55
UniRef90 UniRef90_F6A950

Product

Feature Type CDS
Coding Frame 1
Product Name
pseudouridine synthase
Synonyms
Evidence for Translation
Charge (pH 7) 17.93
Kyte-Doolittle Hydrophobicity Value -0.974
Molecular Weight (kDa) 43209.7
Isoelectric Point (pI) 10.72

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 579 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002437 (532 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psefu_2006

Human Homologs

References

No references are associated with this feature.