Pseudomonas fulva 12-X, Psefu_2326

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fulva 12-X
GCF_000213805.1|latest
Locus Tag
Psefu_2326
Name
Replicon chromosome
Genomic location 2498177 - 2498443 (- strand)

Cross-References

RefSeq YP_004474387.1
GI 333900514
Entrez 10657408
INSDC AEF22293.1
NCBI Locus Tag Psefu_2326
UniParc UPI00020CC4C3
UniProtKB Acc F6ACB1
UniProtKB ID F6ACB1_PSEF1
UniRef100 UniRef100_F6ACB1
UniRef50 UniRef50_Q88FS3
UniRef90 UniRef90_F6ACB1

Product

Feature Type CDS
Coding Frame 1
Product Name
cold-shock DNA-binding domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) 2.46
Kyte-Doolittle Hydrophobicity Value -0.150
Molecular Weight (kDa) 9204.3
Isoelectric Point (pI) 9.58

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 499 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002930 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psefu_2326

Human Homologs

Ensembl 110, assembly GRCh38.p14
lin-28 homolog A [Source:HGNC Symbol;Acc:HGNC:15986]
E-value: 7.3e-07
Percent Identity: 34.3
Ensembl 110, assembly GRCh38.p14
lin-28 homolog A [Source:HGNC Symbol;Acc:HGNC:15986]
E-value: 7.3e-07
Percent Identity: 34.3

References

No references are associated with this feature.