Pseudomonas fulva 12-X, Psefu_3089

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fulva 12-X
GCF_000213805.1|latest
Locus Tag
Psefu_3089
Name
Replicon chromosome
Genomic location 3309563 - 3311035 (- strand)

Cross-References

RefSeq YP_004475147.1
GI 333901274
Entrez 10658202
INSDC AEF23053.1
NCBI Locus Tag Psefu_3089
UniParc UPI00020CCA7C
UniProtKB Acc F6A8I2
UniProtKB ID F6A8I2_PSEF1
UniRef100 UniRef100_F6A8I2
UniRef50 UniRef50_G3XCV0
UniRef90 UniRef90_F6A8I2

Product

Feature Type CDS
Coding Frame 1
Product Name
Fis family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -14.16
Kyte-Doolittle Hydrophobicity Value -0.352
Molecular Weight (kDa) 55475.7
Isoelectric Point (pI) 5.16

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
6JDL TRANSCRIPTION 02/01/19 Central domain of FleQ H287A mutant in complex with ATPgS and Mg Pseudomonas aeruginosa 2.249 X-RAY DIFFRACTION 95.0
5EXT TRANSCRIPTION 11/24/15 AAA+ domain of FleQ from Pseudomonas aeruginosa bound to ADP Pseudomonas aeruginosa 2.4 X-RAY DIFFRACTION 95.7
6JDI TRANSCRIPTION 02/01/19 Central domain of FleQ H287N mutant in complex with ATPgS and Mg Pseudomonas aeruginosa 1.95 X-RAY DIFFRACTION 95.0
5EXP TRANSCRIPTION 11/24/15 AAA+ domain of FleQ from Pseudomonas aeruginosa Pseudomonas aeruginosa 1.8 X-RAY DIFFRACTION 95.7
5EXS TRANSCRIPTION 11/24/15 AAA+ ATPase FleQ from Pseudomonas aeruginosa bound to ATP-gamma-S Pseudomonas aeruginosa 2.5 X-RAY DIFFRACTION 95.7
6J7E TRANSCRIPTION 01/18/19 Crystal Structure of Central domain of FleQ in complex with ATPgS and Mg Pseudomonas aeruginosa 2.4 X-RAY DIFFRACTION 95.4
5EXX TRANSCRIPTION 11/24/15 AAA+ ATPase FleQ from Pseudomonas aeruginosa bound to c-di-GMP Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) 3.311 X-RAY DIFFRACTION 92.4
7EJW TRANSCRIPTION 04/02/21 Crystal structure of FleN in complex with FleQ AAA+ doamain Pseudomonas aeruginosa PAO1 1.98 X-RAY DIFFRACTION 95.3

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 453 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001058 (532 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psefu_3089

Human Homologs

References

No references are associated with this feature.