Pseudomonas fulva 12-X, Psefu_3340

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas fulva 12-X
GCF_000213805.1|latest
Locus Tag
Psefu_3340
Name
Replicon chromosome
Genomic location 3593661 - 3595997 (- strand)

Cross-References

RefSeq YP_004475396.1
GI 333901523
EC Number 3.2.1.81
Entrez 10658740
NCBI Locus Tag Psefu_3340

Product

Feature Type CDS
Coding Frame 1
Product Name
beta-agarase
Synonyms
Evidence for Translation
Charge (pH 7) -18.33
Kyte-Doolittle Hydrophobicity Value -0.455
Molecular Weight (kDa) 85905.6
Isoelectric Point (pI) 4.83

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 30 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001008 (463 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psefu_3340
Search term: beta-agarase

Human Homologs

References

No references are associated with this feature.