Pseudomonas fulva 12-X, Psefu_3628

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fulva 12-X
GCF_000213805.1|latest
Locus Tag
Psefu_3628
Name
Replicon chromosome
Genomic location 3902994 - 3903368 (- strand)

Cross-References

RefSeq YP_004475683.1
GI 333901810
Entrez 10657869
INSDC AEF23589.1
NCBI Locus Tag Psefu_3628
UniParc UPI00020CC976
UniProtKB Acc F6AEU5
UniProtKB ID F6AEU5_PSEF1
UniRef100 UniRef100_F6AEU5
UniRef50 UniRef50_Q02SH2
UniRef90 UniRef90_F6AEU5

Product

Feature Type CDS
Coding Frame 1
Product Name
iojap family protein
Synonyms
Evidence for Translation
Charge (pH 7) -7.28
Kyte-Doolittle Hydrophobicity Value -0.403
Molecular Weight (kDa) 13813.5
Isoelectric Point (pI) 4.55

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 565 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001678 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psefu_3628

Human Homologs

Ensembl 110, assembly GRCh38.p14
mitochondrial assembly of ribosomal large subunit 1 [Source:HGNC Symbol;Acc:HGNC:21721]
E-value: 8.7e-14
Percent Identity: 36.6

References

No references are associated with this feature.