Pseudomonas fulva 12-X, Psefu_3929

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fulva 12-X
GCF_000213805.1|latest
Locus Tag
Psefu_3929
Name
Replicon chromosome
Genomic location 4263972 - 4264646 (- strand)

Cross-References

RefSeq YP_004475979.1
GI 333902106
EC Number 5.1.3.1
Entrez 10654863
INSDC AEF23885.1
NCBI Locus Tag Psefu_3929
UniParc UPI00020CC20B
UniProtKB Acc F6AI59
UniProtKB ID F6AI59_PSEF1
UniRef100 UniRef100_F6AI59
UniRef50 UniRef50_P40117
UniRef90 UniRef90_C1DIV2

Product

Feature Type CDS
Coding Frame 1
Product Name
ribulose-phosphate 3-epimerase
Synonyms
Evidence for Translation
Charge (pH 7) -7.83
Kyte-Doolittle Hydrophobicity Value 0.182
Molecular Weight (kDa) 24093.5
Isoelectric Point (pI) 4.78

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 594 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000590 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psefu_3929

Human Homologs

Ensembl 110, assembly GRCh38.p14
ribulose-5-phosphate-3-epimerase [Source:HGNC Symbol;Acc:HGNC:10293]
E-value: 6.3e-39
Percent Identity: 40.1

References

No references are associated with this feature.