Pseudomonas fulva 12-X, Psefu_4142
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas fulva 12-X
GCF_000213805.1|latest |
| Locus Tag |
Psefu_4142
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 4515961 - 4517340 (+ strand) |
Cross-References
| RefSeq | YP_004476191.1 |
| GI | 333902318 |
| Entrez | 10656142 |
| NCBI Locus Tag | Psefu_4142 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
DEAD/DEAH box helicase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 5.72 |
| Kyte-Doolittle Hydrophobicity Value | -0.021 |
| Molecular Weight (kDa) | 49425.7 |
| Isoelectric Point (pI) | 8.48 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 611 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000446 (534 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: Psefu_4142
Search term: DEAD/DEAH box helicase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 42 [Source:HGNC Symbol;Acc:HGNC:18676]
E-value:
2.5e-58
Percent Identity:
37.3
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 42 [Source:HGNC Symbol;Acc:HGNC:18676]
E-value:
2.5e-58
Percent Identity:
37.3
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 42 [Source:HGNC Symbol;Acc:HGNC:18676]
E-value:
2.5e-58
Percent Identity:
37.3
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 42 [Source:HGNC Symbol;Acc:HGNC:18676]
E-value:
2.5e-58
Percent Identity:
37.3
|
References
No references are associated with this feature.