Pseudomonas fulva 12-X, Psefu_4287

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fulva 12-X
GCF_000213805.1|latest
Locus Tag
Psefu_4287
Name
Replicon chromosome
Genomic location 4677576 - 4679114 (- strand)

Cross-References

RefSeq YP_004476333.1
GI 333902460
Entrez 10657324
INSDC AEF24239.1
NCBI Locus Tag Psefu_4287
UniParc UPI00020CCD17
UniProtKB Acc F6A8T4
UniProtKB ID F6A8T4_PSEF1
UniRef100 UniRef100_F6A8T4
UniRef50 UniRef50_P46493
UniRef90 UniRef90_F6A8T4

Product

Feature Type CDS
Coding Frame 1
Product Name
threonine dehydratase
Synonyms
Evidence for Translation
Charge (pH 7) -7.56
Kyte-Doolittle Hydrophobicity Value -0.152
Molecular Weight (kDa) 55988.4
Isoelectric Point (pI) 6.29

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 591 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000323 (843 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psefu_4287

Human Homologs

Ensembl 110, assembly GRCh38.p14
serine racemase [Source:HGNC Symbol;Acc:HGNC:14398]
E-value: 1.7e-39
Percent Identity: 38.7

References

No references are associated with this feature.