Pseudomonas fulva 12-X, Psefu_4489

Gene Feature Overview

Strain	Pseudomonas fulva 12-X GCF_000213805.1|latest
Locus Tag	Psefu_4489
Name
Replicon	chromosome
Genomic location	4909382 - 4911274 (- strand)

Cross-References

RefSeq	YP_004476535.1
GI	333902662
Entrez	10657415
INSDC	AEF24441.1
NCBI Locus Tag	Psefu_4489
UniParc	UPI00020CC23F
UniProtKB Acc	F6AB83
UniProtKB ID	F6AB83_PSEF1
UniRef100	UniRef100_F6AB83
UniRef50	UniRef50_Q4K399
UniRef90	UniRef90_Q4K399

Product

Feature Type	CDS
Coding Frame	1
Product Name	tRNA uridine 5-carboxymethylaminomethyl modification protein MnmG
Synonyms
Evidence for Translation
Charge (pH 7)	-6.72
Kyte-Doolittle Hydrophobicity Value	-0.303
Molecular Weight (kDa)	69278.1
Isoelectric Point (pI)	6.18

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 507 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG005096 (534 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: Psefu_4489 Search term: tRNA uridine 5-carboxymethylaminomethyl modification protein MnmG

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000419561 mitochondrial tRNA translation optimization 1 [Source:HGNC Symbol;Acc:HGNC:19261] E-value: 1.2e-146 Percent Identity: 47.2

References