Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a49

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a49
Name
Replicon chromosome
Genomic location 58858 - 60204 (- strand)

Cross-References

RefSeq YP_004351172.1
GI 330806710
Entrez 10468862
INSDC AEA66168.1
NCBI Locus Tag PSEBR_a49
UniParc UPI0002041FBD
UniProtKB Acc F2KAG9
UniProtKB ID F2KAG9_PSEBN
UniRef100 UniRef100_A0A0D0T4L2
UniRef50 UniRef50_P23747
UniRef90 UniRef90_Q88AQ2

Product

Feature Type CDS
Coding Frame 1
Product Name
alginate biosynthesis transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -7.23
Kyte-Doolittle Hydrophobicity Value -0.218
Molecular Weight (kDa) 49.5
Isoelectric Point (pI) 5.56

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 619 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005023 (531 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a49

Human Homologs

References

No references are associated with this feature.