Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a384

Gene Feature Overview

Strain	Pseudomonas brassicacearum subsp. brassicacearum NFM421 GCF_000194805.1|latest
Locus Tag	PSEBR_a384
Name
Replicon	chromosome
Genomic location	473186 - 474718 (+ strand)

Cross-References

RefSeq	YP_004351529.1
GI	330807067
Entrez	10469228
INSDC	AEA66525.1
NCBI Locus Tag	PSEBR_a384
UniParc	UPI0002040EF8
UniProtKB Acc	F2KDA5
UniProtKB ID	F2KDA5_PSEBN
UniRef100	UniRef100_F2KDA5
UniRef50	UniRef50_P21310
UniRef90	UniRef90_F2KDA5

Product

Feature Type	CDS
Coding Frame	1
Product Name	histidine ammonia-lyase
Synonyms
Evidence for Translation
Charge (pH 7)	-9.76
Kyte-Doolittle Hydrophobicity Value	0.174
Molecular Weight (kDa)	53.9
Isoelectric Point (pI)	5.31

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 301 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004694 (505 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSEBR_a384 Search term: histidine ammonia-lyase

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000261208 histidine ammonia-lyase [Source:HGNC Symbol;Acc:HGNC:4806] E-value: 3.3e-107 Percent Identity: 45.3

References