Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a435

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a435
Name
Replicon chromosome
Genomic location 538001 - 538891 (+ strand)

Cross-References

RefSeq YP_004351582.1
GI 330807120
Entrez 10469281
INSDC AEA66578.1
NCBI Locus Tag PSEBR_a435
UniParc UPI0002041078
UniProtKB Acc F2KDF8
UniProtKB ID F2KDF8_PSEBN
UniRef100 UniRef100_A0A0D0RX29
UniRef50 UniRef50_P77559
UniRef90 UniRef90_G8Q2Q2

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -3.79
Kyte-Doolittle Hydrophobicity Value 0.086
Molecular Weight (kDa) 32.5
Isoelectric Point (pI) 5.72

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 547 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003437 (1043 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a435

Human Homologs

References

No references are associated with this feature.