Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a538

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a538
Name
Replicon chromosome
Genomic location 670950 - 672380 (+ strand)

Cross-References

RefSeq YP_004351690.1
GI 330807228
Entrez 10469389
INSDC AEA66686.1
NCBI Locus Tag PSEBR_a538
UniParc UPI00020415EB
UniProtKB Acc F2KBI4
UniProtKB ID F2KBI4_PSEBN
UniRef100 UniRef100_A0A0D0RJF9
UniRef50 UniRef50_G8Q3Z0
UniRef90 UniRef90_G8Q3Z0

Product

Feature Type CDS
Coding Frame 1
Product Name
N-acetylmuramoyl-L-alanine amidase
Synonyms
Evidence for Translation
Charge (pH 7) 9.45
Kyte-Doolittle Hydrophobicity Value -0.094
Molecular Weight (kDa) 50.5
Isoelectric Point (pI) 10.30

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 471 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004562 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a538

Human Homologs

References

No references are associated with this feature.