Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a1001

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a1001
Name
Replicon chromosome
Genomic location 1271114 - 1271656 (+ strand)

Cross-References

RefSeq YP_004352178.1
GI 330807716
Entrez 10469888
INSDC AEA67174.1
NCBI Locus Tag PSEBR_a1001
UniParc UPI000204149C
UniProtKB Acc F2KCP2
UniProtKB ID F2KCP2_PSEBN
UniRef100 UniRef100_A0A0D0S257
UniRef50 UniRef50_C1DSZ1
UniRef90 UniRef90_I7BB50

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -6.31
Kyte-Doolittle Hydrophobicity Value -0.397
Molecular Weight (kDa) 20.8
Isoelectric Point (pI) 4.80

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
2OT9 STRUCTURAL GENOMICS, UNKNOWN FUNCTION 02/07/07 Crystal structure of YaeQ protein from Pseudomonas syringae PSEUDOMONAS SYRINGAE PV. TOMATO 1.97 X-RAY DIFFRACTION 95.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 118 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001957 (554 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a1001

Human Homologs

References

No references are associated with this feature.