Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a1098

Gene Feature Overview

Strain	Pseudomonas brassicacearum subsp. brassicacearum NFM421 GCF_000194805.1|latest
Locus Tag	PSEBR_a1098
Name
Replicon	chromosome
Genomic location	1377379 - 1379958 (- strand)

Cross-References

RefSeq	YP_004352276.1
GI	330807814
Entrez	10469986
INSDC	AEA67272.1
NCBI Locus Tag	PSEBR_a1098
UniParc	UPI0002041771
UniProtKB Acc	F2KDV3
UniProtKB ID	F2KDV3_PSEBN
UniRef100	UniRef100_A0A0D0R2S7
UniRef50	UniRef50_Q9S6P8
UniRef90	UniRef90_Q3KH79

Product

Feature Type	CDS
Coding Frame	1
Product Name	DNA mismatch repair protein, MutS Family domain V
Synonyms
Evidence for Translation
Charge (pH 7)	-11.67
Kyte-Doolittle Hydrophobicity Value	-0.188
Molecular Weight (kDa)	95.3
Isoelectric Point (pI)	5.96

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 547 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002054 (535 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSEBR_a1098 Search term: DNA mismatch repair protein, MutS Family domain V

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000499617 mutS homolog 3 [Source:HGNC Symbol;Acc:HGNC:7326] E-value: 1.4e-65 Percent Identity: 27.6
Ensembl 110, assembly GRCh38.p14	ENSP00000265081 mutS homolog 3 [Source:HGNC Symbol;Acc:HGNC:7326] E-value: 1.4e-65 Percent Identity: 27.6

References