Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a1125

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a1125
Name
Replicon chromosome
Genomic location 1405043 - 1406161 (- strand)

Cross-References

RefSeq YP_004352306.1
GI 330807844
Entrez 10470016
INSDC AEA67302.1
NCBI Locus Tag PSEBR_a1125
UniParc UPI00020418B0
UniProtKB Acc F2K8I6
UniProtKB ID F2K8I6_PSEBN
UniRef100 UniRef100_A0A0D0SUP6
UniRef50 UniRef50_G8QC58
UniRef90 UniRef90_G8QC58

Product

Feature Type CDS
Coding Frame 1
Product Name
decarboxylase
Synonyms
Evidence for Translation
Charge (pH 7) -1.51
Kyte-Doolittle Hydrophobicity Value -0.389
Molecular Weight (kDa) 42.8
Isoelectric Point (pI) 6.83

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 361 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002059 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a1125
Search term: decarboxylase

Human Homologs

References

No references are associated with this feature.