Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a1140

Gene Feature Overview

Strain	Pseudomonas brassicacearum subsp. brassicacearum NFM421 GCF_000194805.1|latest
Locus Tag	PSEBR_a1140
Name
Replicon	chromosome
Genomic location	1422772 - 1423833 (+ strand)

Cross-References

RefSeq	YP_004352322.1
GI	330807860
Entrez	10470034
INSDC	AEA67318.1
NCBI Locus Tag	PSEBR_a1140
UniParc	UPI00020418BF
UniProtKB Acc	F2K8K2
UniProtKB ID	F2K8K2_PSEBN
UniRef100	UniRef100_A0A0D0R3V1
UniRef50	UniRef50_Q6D1H8
UniRef90	UniRef90_E2XXJ0

Product

Feature Type	CDS
Coding Frame	1
Product Name	DNA-directed DNA polymerase
Synonyms
Evidence for Translation
Charge (pH 7)	4.75
Kyte-Doolittle Hydrophobicity Value	-0.231
Molecular Weight (kDa)	39.3
Isoelectric Point (pI)	8.36

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 520 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000889 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSEBR_a1140 Search term: DNA-directed DNA polymerase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000258428 REV1 DNA directed polymerase [Source:HGNC Symbol;Acc:HGNC:14060] E-value: 1.9e-37 Percent Identity: 30.5
Ensembl 110, assembly GRCh38.p14	ENSP00000377091 REV1 DNA directed polymerase [Source:HGNC Symbol;Acc:HGNC:14060] E-value: 1.9e-37 Percent Identity: 30.6

References