Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a1217

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a1217
Name
Replicon chromosome
Genomic location 1508354 - 1509700 (+ strand)

Cross-References

RefSeq YP_004352400.1
GI 330807938
Entrez 10470112
INSDC AEA67396.1
NCBI Locus Tag PSEBR_a1217
UniParc UPI0002041CA5
UniProtKB Acc F2KCV6
UniProtKB ID F2KCV6_PSEBN
UniRef100 UniRef100_A0A0D0RZ02
UniRef50 UniRef50_Q51485
UniRef90 UniRef90_J2YEB4

Product

Feature Type CDS
Coding Frame 1
Product Name
porin B
Synonyms
Evidence for Translation
Charge (pH 7) -9.20
Kyte-Doolittle Hydrophobicity Value -0.528
Molecular Weight (kDa) 49.5
Isoelectric Point (pI) 5.57

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 48 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002430 (700 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a1217
Search term: porin B

Human Homologs

References

No references are associated with this feature.