Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a1326

Gene Feature Overview

Strain	Pseudomonas brassicacearum subsp. brassicacearum NFM421 GCF_000194805.1|latest
Locus Tag	PSEBR_a1326
Name
Replicon	chromosome
Genomic location	1630256 - 1630948 (+ strand)

Cross-References

RefSeq	YP_004352517.1
GI	330808055
Entrez	10470230
INSDC	AEA67513.1
NCBI Locus Tag	PSEBR_a1326
UniParc	UPI0002040AB8
UniProtKB Acc	F2KE36
UniProtKB ID	F2KE36_PSEBN
UniRef100	UniRef100_F2KE36
UniRef50	UniRef50_Q8X444
UniRef90	UniRef90_Q4KGS0

Product

Feature Type	CDS
Coding Frame	1
Product Name	uracil-DNA glycosylase
Synonyms
Evidence for Translation
Charge (pH 7)	2.57
Kyte-Doolittle Hydrophobicity Value	-0.306
Molecular Weight (kDa)	25780.3
Isoelectric Point (pI)	7.81

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 352 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000724 (535 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSEBR_a1326 Search term: uracil-DNA glycosylase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000337398 uracil DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:12572] E-value: 3.8e-63 Percent Identity: 51.9
Ensembl 110, assembly GRCh38.p14	ENSP00000242576 uracil DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:12572] E-value: 3.8e-63 Percent Identity: 51.9

References