Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a1340

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a1340
Name
Replicon chromosome
Genomic location 1644916 - 1645863 (+ strand)

Cross-References

RefSeq YP_004352533.1
GI 330808071
Entrez 10470246
INSDC AEA67529.1
NCBI Locus Tag PSEBR_a1340
UniParc UPI0002040AC7
UniProtKB Acc F2KE52
UniProtKB ID F2KE52_PSEBN
UniRef100 UniRef100_F2KE52
UniRef50 UniRef50_P38108
UniRef90 UniRef90_I4L0W5

Product

Feature Type CDS
Coding Frame 1
Product Name
negative regulator for alginate biosynthesis
Synonyms
Evidence for Translation
Charge (pH 7) -1.41
Kyte-Doolittle Hydrophobicity Value -0.287
Molecular Weight (kDa) 34.6
Isoelectric Point (pI) 6.63

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 110 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000738 (527 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a1340

Human Homologs

References

No references are associated with this feature.