Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a1368

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a1368
Name
Replicon chromosome
Genomic location 1673689 - 1674621 (+ strand)

Cross-References

RefSeq YP_004352562.1
GI 330808100
Entrez 10470276
INSDC AEA67558.1
NCBI Locus Tag PSEBR_a1368
UniParc UPI0002040C3E
UniProtKB Acc F2K8T3
UniProtKB ID F2K8T3_PSEBN
UniRef100 UniRef100_A0A0D0SZL9
UniRef50 UniRef50_D7HXF1
UniRef90 UniRef90_G8PYH9

Product

Feature Type CDS
Coding Frame 1
Product Name
dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -1.14
Kyte-Doolittle Hydrophobicity Value 0.020
Molecular Weight (kDa) 34.2
Isoelectric Point (pI) 6.72

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 619 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001240 (513 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a1368
Search term: dehydrogenase

Human Homologs

Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 3.4e-06
Percent Identity: 30.0
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 3.4e-06
Percent Identity: 30.0
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 3.4e-06
Percent Identity: 30.0
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 3.4e-06
Percent Identity: 30.0
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 3.4e-06
Percent Identity: 30.0
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 3.4e-06
Percent Identity: 30.0
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 3.4e-06
Percent Identity: 30.0

References

No references are associated with this feature.